Cryo-EM protein structure visualization
Free for Academic & Commercial UseBeta Available - Try It & Share Feedback

Process Cryo-EM Data with Ease

A modern web interface for RELION cryo-electron microscopy single-particle analysis. Submit jobs, monitor pipelines in real time, and analyze structures from your browser. Free for all users.

CryoProcess is an independent project and is not affiliated with or endorsed by the RELION developers.

Live Processing

Real-time job monitoring

RELION 5

Latest engine supported

SLURM Native

HPC cluster integration

3-Step Setup

Clone, install, start

Quickly view and manage your cryo-EM metadata from any browser

  • Browse micrographs, CTF estimates, and particle picks in one place
  • Track live pipeline progress from any browser
  • Submit SLURM jobs with pre-configured templates
  • New lab members start processing on day one

CryoProcess wraps the power of RELION in a modern web interface, making cryo-EM data processing accessible to your entire lab.

CryoProcess 3D volume viewer

Everything you need

Purpose-built for structural biology labs running RELION on HPC clusters.

Browser-Based GUI

Submit and monitor RELION jobs with live processing updates through an intuitive web interface. No X11 forwarding, no VNC, no SSH tunnels.

SLURM Integration

Native SLURM job submission with configurable partitions, GPU allocation, and time limits. Live status updates as jobs run on your cluster.

One-Command Deploy

Install CryoProcess on your server with a single script. Automatic dependency detection for Ubuntu, Debian, CentOS, and RHEL.

Live Processing

Watch your results unfold in real time

CryoProcess does not just submit jobs, it keeps you connected to every step. Monitor processing progress, view intermediate results, and catch issues early without switching between terminal windows.

Real-Time Job Monitoring

Track SLURM job status, resource usage, and progress as your data is processed on the cluster.

Live Result Preview

Monitor micrograph processing and 2D classification as they are generated.

Instant Pipeline Feedback

Get immediate feedback on each processing step so you can adjust parameters and resubmit without delay.

CryoProcess live processing dashboard with real-time job monitoring

From Micrographs to Maps

CryoProcess guides you through the complete single-particle analysis pipeline, from movie import through 3D refinement.

1.Import Movies
2.Motion Correction
3.CTF Estimation
4.Particle Picking
5.2D Classification
6.3D Reconstruction
7.Refinement
8.Post-Processing

Why Choose CryoProcess for Cryo-EM?

CryoProcess provides a free, browser-based interface for RELION cryo-electron microscopy data processing. Whether you are running single-particle analysis, 2D classification, 3D reconstruction, or CTF estimation, CryoProcess makes it accessible from any browser on your HPC cluster.

Built on RELION

Uses the trusted RELION algorithms for cryo-EM single-particle analysis. Every job runs real RELION under the hood.

Free for Everyone

Unlike commercial cryo-EM software, CryoProcess is completely free for academic and industry use with no licensing fees.

HPC Ready

Native SLURM integration with Singularity containers. Designed for structural biology labs running cryo-EM on computing clusters.

Ready to simplify your cryo-EM workflow?

Free for all academic and commercial use.